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* Isolates used in this study (Jaime Blair et al., Fungal Genetics & Biology)

		Isolate Details					Number of
	Phytophthora	Isolate Identification		Isolate Origins			Isolates	Waterhouse
Clade¹	Species	Local²	International³	Host	Country	Date	Sequenced	Group
1	P. nicotianae	P6303		Grammatophyllum sp.	Indonesia	1989	9	II
1a	P. cactorum	P0714	ATCC10091	Syringa vulgaris	The Netherlands	1930⁴	3	I
			CBS231.30
	P. hedraiandra	P11056		Rhododendron sp.	USA	2006⁵	3	I
	P. idaei (T)⁶	P6767		Rubus idaeus	UK	1989⁵	1	I
	P. pseudotsugae (T)⁶	P10339	IMI331662	Pseudotsuga menziesii	USA	2003⁵	2	I
1b	P. clandestina	P3942	ATCC58715	Trifolium subterraneum	Australia	1986⁴	1	I
			CBS349.86
	P. iranica (T)⁶	P3882	ATCC60237	Solanum melongena	Iran	1969	1	I
			CBS374.72
			IMI158964
	P. tentaculata	P8497		Chrysanthemum leucanthemum	Germany	1994⁵	2	I
1c	P. sp. "andina" (T)⁶	P13365		Solanum brevifolium	Ecuador	2001	2	IV
	P. infestans	P10650		Solanum tuberosum	Mexico	2004⁵	3	IV
	P. ipomoeae	P10225		Ipomoea longipedunculata	Mexico	2003⁵	3	IV
	P. mirabilis	P3005	ATCC64068	Mirabilis jalapa	Mexico		2	IV
	P. phaseoli	P10145		Phaseolus lunatus	USA	2003⁵	5	IV
2	P. bisheria (T)⁶	P10117		Fragaria sp.	USA	1999	2	na
	P. citricola	P7902		Pinus radiata	USA	1993	7	III
	P. multivesiculata (T)⁶	P10410	CBS545.96	Cymbidium sp.	The Netherlands	1995	3	IV
2a	P. botryosa	P6945	IMI130422	Hevea brasiliensis	Malaysia	1986	1	II
	P. citrophthora	P6310		Theobroma cacao	Indonesia	1989	1	II
	P. colocasiae	P6317		Colocasia esculenta	Indonesia	1989	2	IV
	P. inflata	P10341	IMI342898	Syringa vulgaris	UK	1990	2	III
	P. meadii	P6128	ICRI-240	Elettaria cardamomum	India	1989⁵	2	II
2b	P. capsici	P0253	ATCC46012	Theobroma cacao	Mexico	1964	8	II
	P. sp. "glovera"	P10619		Nicotiana sp.	Brazil		2	na
	P. mexicana (T)⁶	P0646	ATCC46731	Solanum lycopersicum	Mexico	1988⁴	1	II
			CBS554.88
			IMI092550
	P. tropicalis (T)⁶	P10329	CBS434.91	Macadamia integrifolia	USA (Hawaii)	1975	3	II
3	P. ilicis	P3939	ATCC56615	Ilex sp.	Canada	1988⁵	2	IV
	P. nemorosa	P10288		Lithocarpus densiflorus	USA	2003⁵	2	IV
	P. pseudosyringae	P10437		Quercus robur	Germany	1997	3	III
	P. psychrophila (T)⁶	P10433		Quercus robur	Germany	1995	2	IV
4	P. arecae	P10213	ATCC-MYA4039	Citrus sp.	USA	2003⁵	3	II
	P. megakarya	P8516		Theobroma cacao	Sao Tome		3	II
	P. palmivora	P0255	ATCC26200	Theobroma cacao	Costa Rica	1964	3	II
	P. sp. "quercetorum"	MD9-2	ATCC-MYA4086	Quercus rubra rhizosphere	USA	2004	1	I
	P. quercina (T)⁶	P10334	CBS782.95	Quercus robur	Germany	1995	2	I
5	P. heveae	P10167	ATCC16701	soil	USA	2003⁵	3	II
			IMI131373
	P. katsurae	P10187		Castanea crenata	Japan	1970	3	II
6	P. sp. "asparagi"	P10690		Asparagus officinalis	New Zealand	1986	1	V
	P. gonapodyides	P10337		Salix matsudana	UK	1972	4	VI
	P. humicola (T)⁶	P3826	ATCC52179	citrus grove soil	Taiwan	1977	2	V
			CBS200.81
			IMI302303
	P. inundata	P8478	IMI389750	Aesculus hippocastanum	UK	1970	2	VI
	P. megasperma	P3136		Brassica napus var. napus	Australia	1985⁵	2	V
	P. sp. "personii"	P11555		Nicotiana tabacum	USA	2006⁵	2	na
7a	P. alni	P10568		Alnus glutinosa	Hungary	1999	3	VI
	P. cambivora	P0592	ATCC46719	Abies procera	USA		3	VI
	P. europaea (T)⁶	P10324	CBS109049	Quercus rhizosphere	France	1998	3	V
	P. fragariae var. fragariae	P3821	ATCC36057	Fragaria sp.	UK	1969	2	V
	P. uliginosa	P10328	CBS109055	Quercus robur rhizosphere	Germany	1998	2	V
7b	P. cajani	P3105	ATCC44388	Cajanus cajan	India		1	VI
	P. cinnamomi	P2159	ATCC46678	Vitis vinifera	South Africa	1971	4	VI
			IMI157799
	P. cinnamomi var. parvispora	P8495		Beaucarnea sp.	Germany	1994⁵	2	VI
	P. melonis	P10994		Trichosanthes dioica	India		2	VI
	P. sp. "niederhauserii"	P10617		Thuja occidentalis	USA	2001	2	na
	P. pistaciae	P6197	ATCC62268	Pistacia vera	Iran		2	V
	P. sinensis (T)⁶	P1475	ATCC46538	Cucumis sativus	China	1988	1	VI
			CBS557.88
	P. sojae	P3114		Glycine max	USA		2	V
	P. vignae	P3019		Vigna unguiculata	Australia		2	VI
8a	P. cryptogea	P1088	ATCC46721	Aster sp.	USA	1935⁴	3	VI
			CBS290.35
	P. drechsleri	P10331		Gerbera jamesonii	USA	2003	3	VI
	P. erythroseptica	P1699	ATCC36302	Solanum tuberosum	USA	1987⁴	3	VI
			CBS956.87
	P. sp. "kelmania"	P10613		Abies fraseri	USA	2002	2	na
	P. medicaginis	P10683	ATCC32997	Medicago sativa	USA		2	V
	P. richardiae	P10811		Zantedeschia aethiopica	Japan	1989	9	VI
	P. sp. "sansomea"	P3163	CBS117692	Silene latifolia subsp. alba	USA		1	V
	P. trifolii	P7010		Trifolium sp.	USA		2	V
8b	P. brassicae	P10414	CBS113350	Brassica oleraceae	The Netherlands	1994	5	IV
	P. porri	P10728		Daucus carota	France	2004	3	III
	P. primulae	P10333	CBS620.97	Primula acaulis	Germany	1997	3	III
	P. syringae	P10330	CBS110161	Rhododendron sp.	Germany	1995	2	III
8c	P. foliorum	P10969		Rhododendron sp.	USA	2005	4	III
	P. hibernalis	P3822	ATCC56353	Citrus sinensis	Australia	1958	3	IV
			CBS114104
			IMI134760
	P. lateralis	P3888		Chamaecyparis lawsoniana	USA	1988⁵	2	V
	P. ramorum	P10301	CBS101329	Rhododendron sp.	The Netherlands	1998	9	IV
9	P. captiosa (T)⁶	P10719		Eucalyptus saligna	New Zealand	1992	2	VI
	P. sp. "cuyabensis"	P8213		rainforest soil	Ecuador		3	V
	P. fallax	P10725		Eucalyptus fastigata	New Zealand	2004	2	VI
	P. insolita (T)⁶	P6195	ATCC38789	soil	Taiwan	1979	2	V
			CBS691.79
			IMI288805
	P. sp. "lagoariana"	P8223		rainforest soil	Ecuador		2	na
	P. macrochlamydospora	P10267		Glycine max	Australia	1994	3	VI
	P. polonica	P15005		Alnus glutinosa rhizosphere	Poland	2006⁵	3	V
	P. quininea	P3247	ATCC56964	Cinchona officinalis	Peru	1948⁴	2	V
			CBS406.48
10	P. boehmeriae (T)⁶	P6950	CBS291.29	Boehmeria nivea	Taiwan	1929⁴	1	II
			IMI180614
	P. kernoviae	P10681		Annona cherimola	New Zealand	2002	5	II
Outgroups
	Pythium undulatum	P10342	IMI337230	Larix sp.	UK	1989	1
	Pythium vexans	P3980	ATCC12194			1989⁵	1
			CBS340.49
			IMI32044

1 – Molecular clade as shown in Figure 1.

2 – Local identification numbers from the World Phytophthora Genetic Resource Collection (P) and West Virginia University (MD).

3 – International identification abbreviations: ATCC, American Type Culture Collection, USA; CBS, Centraalbureau fur Schimmelcultures, The Netherlands; ICRI, Indian Cardamom Research Institute, India; IMI, CABI Biosciences, UK.

4 – Date culture was obtained by CBS.

5 – Date culture was obtained by the World Phytophthora Genetic Resource Collection.

6 – Type isolate of the species (T).

na – not available.

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